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Everything posted by Alison

  1. If all of these variables do not need to vary, then the "Fixed State" option would work fine. If you need to vary the temperature or pressure of the boundary, then the very large volume option (either set to geometric cells or an extra cell) would be more appropriate. This way, you could add large amounts of water or heat to the cells to force fluctuations in temperature or pressure. There is a discussion of time-varying boundaries in the PetraSim manual.
  2. If you do a literature search for TOUGHREACT and Clay Swelling, a few articles do pop up on Google. Many of them seem to be by the TOUGHREACT authors at LBL, so you may want to contact them to see if they have any tips on how the simulated the swelling of the clay minerals.
  3. I think the answer to your question is yes, but you may need to provide an example to confirm. When viewing model results in 3D, there is an option to turn on isosurfaces. These basically connect points of equal pressure and temperature. PetraSim does not create 2D contour maps. If you need to create lines of equal pressure or temperature (say, from a slice of a model), you would probably want to export results to another program such as RockWorks, Surfer or TecPlot.
  4. We are not able to duplicate this problem with one of our files, so we would need to see your SIM file to determine what is going on. We also need to know which version of PetraSim you are running. Best Regards, Alison
  5. Unfortunately, aqueous complexes were not output in TOUGHREACT v1.2, which is the version of TOUGHREACT that is packaged with PetraSim. This feature was added in later versions of TOUGHREACT. You might consider purchasing TOUGHREACT v3.3, which is available through LBL. PetraSim creates input files for TOUGHREACT v3.3. We hope to add better support with result visualization in the future.
  6. It seems that there is not enough output to show the results. I would recommend the following: 1. For cells where you want to see a detailed time series plot, you should check on the Print options for the cells and rerun the model. This will output data for each time step to a FOFT file, that is then displayed here. You can do this by right clicking on the cell and choosing Edit Cells. 2. You could also increase the number of time steps being output for all cells. This is done through the Analysis|Output Controls menu. The default is to print every 100 time steps. You may need to decrease this to a smaller number.
  7. This is a fairly common message to see during a model run that is often resolved by the simulator with a time step decrease. If you see this error at the beginning of a model, and it is not resolved by a decrease in time step, then it typically indicates a problem with your initial conditions. If the error shows up in the middle of the model run and causes the simulation to halt, then it would indicate that the simulation has reached a state not supported, such as a very high or low pressure or temperature. If you are not sure what the problem is, you could turn on the print options for the problem cell, which would allow you to view time series data at each time step.
  8. The SIM file you provided does not run. It says that it is missing components related to the Co2 and H2S gases. I am not able to help you set up your geochemical model. However, I do see that the initial conditions for the extra cell in your model are set to single phase with an air mass fraction of 0. This would simulate single phase water conditions. If you change the air mass fraction to 1, it will simulate single phase gas conditions. You should try changing this to 1 if you are trying to inject gas using the Extra Cell.
  9. I think we would probably need to see your SIM file to comment on this. Could this have something to do with the initial phase state of the extra cell?
  10. Because you are seeing this error at the beginning of the model run, it looks like you have poorly defined initial conditions. I would suggest you look at the input file to get more information about the problem with data initialization. If a different phase is evolving, (for example, if the water phase is evolving in a single phase system), you should try increasing the air mass fraction. You could also switch to a 2 phase system with a very high gas saturation.
  11. A gas injection zone option is not available in TOUGHREACT v1.2, which is the version included with PetraSim (it is included in TOUGHREACT v3.3, which is available through LBL, but it is not supported in PetraSim). One way to get around this would be to attached an "extra cell" to the injection cell, which a very large volume and a short connection distance. You can assign a gas zone to that cell that represents the gas components you want to inject into the model, and assign a higher pressure to the cell. You can find more about Extra Cells in the PetraSim manual.
  12. I would recommend that you take a look at a steam table (assuming you are injecting water) to get an idea of enthalpy at various pressure and temperature combinations. I am not able to post links on this website, but if you do a Google Search for "spirax sarco steam table", you should be able to get to a series of online calculators. If you are trying to inject at a constant temperature, you should know that the enthalpy needed to maintain a specific injection temperature changes with pressure. So, it can be tricky to inject at a constant temperature in TOUGH2. One option would be to anticipate the enthalpy changes needed to maintain a temperature as pressure goes up and down (and vary it with time). You can also assigning a very large density such as 1e40 (this gives the material a very large heat capacity). If you do this, then the fluid leaving the injection cell will always have the same temperature as the initial temperature of the injection cell.
  13. This is a TOUGHREACT error that indicates a "poorly defined chemical system". Typically, you would want to create a model in a separate program such as PHREEQC or GWV that defines minerals and water chemistry in equilibrium. You can then bring that into a TOUGHREACT model as initial conditions. Best Regards, Alison
  14. The GRDECL import should work with simple mesh configurations. Here are a few suggestions: 1. Cell Layers should be continuous. If cell layers truncate against upper or lower boundaries or internal surfaces, the import will likely not work. 2. You need to be sure that the cell boundaries are rectangular and oriented along the x and y axes. If the cells are oriented at an angle to the axes, the import will not work. 3. The program only imports mesh geometry and porosity values. Other material parameters will be ignored. If you continue to have problems, please send your GRDECL file to alison @ rockware.com, and I will take a look at it. Best Regards, Alison
  15. Sam, You should be able to import this through the Excel|Multiple Tables menu. If the Location and Lithology data have already been imported into the database, you can choose to just import the Stratigraphy by deselecting the Location and Lithology Tables in the Block Selection tab.
  16. Ismena, There is not a direct link between the RW2D files and the borehole data or models, so you will have to recreate the sections if your lithology data has changed. Regarding the annotations, if they are stored in a separate layer in your original RW2D files, you could select the layer and copy and paste the annotations over to the newly created cross-sections. You could also delete all of the layers other than the annotations in the old sections and append the annotations to the new sections through the File|Append menu. Please let us know if you have additional questions. Best Regards, Alison
  17. Ca Ma, Would it work for you to add a cell with a very large volume to the model and assign it a lower pressure, so that flluid will flow into the cell? If you think this would work, you should take a look at the option to add Extra Cells (which are non-geometric cells) to a model. This is discussed in the PetraSim Manual. Best Regards, Alison
  18. Rosialine, RockWorks does not currently include any tools for linking RockWorks lithology models to MODFLOW Flex. The program does include some tools designed to export data to a Groundwater Vistas MODFLOW model. Please take a look at the documentation for these tools in the help files. I think you could probably manually modify the DIS file created by MODFLOW Flex so that it can be used to extract a lithologic value for each cell in your MODFLOW model. You will have to figure out a way to import that data into your MODFLOW Flex file. If you'd like to pursue this further, please send us your lithology model and your DIS file, and we'll try to help you through this process. You can send these files to tech @ rockware.com. Best Regards, Alison
  19. What type of shapefile are you trying to import (points, lines, polylines, etc.)? Regarding the coordinate system, RockWorks does not do any conversion during this import. You should make sure that the shapefile is in the same coordinate system and units as your project. You may need to reproject the shapefile and re-export it from GIS before importing it into RockWorks. If you continue to have problems, please send the shapefile and a description of the problem to tech @ rockware.com.
  20. Yes, this is available under the Grid|Filters|Polygon tool. You'll need to create a polygon table that contains the xy locations for the vertices in the polygon.
  21. When you create a stratigraphy model, top and base RWGRD files are created and stored in your project directory. They are named based on the names of the stratigraphic units in the project. To export one of these RWGRD files as an ASCII file, to go the Grid|Export menu in the Utilities portion of the RockWorks program. There, you'll find the option to export both ASCII file and Surfer GRD files, which would probably work as well in Visual MODFLOW Flex. I hope this helps!
  22. How you approach this probably depends on which MODLFOW interface you are using. I think in most cases, the ASCII XYZ export (through the Grid menu) will likely load as a surface into your MODFLOW interface. I would probably turn off the header, and you can adjust the delimiter based on your preference (tab, comma, space, etc.). Also, if you are using Groundwater Vistas v7 and RockWorks17, we have added some new tools for exporting grids in a format that can be automatically loaded into Groundwater Vistas. You can find more information about this by doing a search for Groundwater Vistas in our Help files.
  23. Jared, I believe that you would want to use effective porosity, but am really not sure about this one. I would recommend that you submit this on the TOUGH forum hosted by LBL. The TOUGH authors are definitely the most qualified people to answer this question. Thanks, Alison
  24. Valentina, Well plots are used to plot mass accumulation in the cells that intersect a well. So, if wells are inactive, you will not be able to view well plots in a SIM file. There was a known bug in PetraSim v2017 where non-interpolated line plots (cell-based plots) were not plotting correctly, so this is likely what you are encountering. This has been resolved in PetraSim v2018. If you continue to have problems or have specific questions about your license status, feel free to contact me at alison @ rockware.com. Best Regards, Alison
  25. It appears that you need to add vertical exaggeration to the striplog (and most likely any sections or fence diagrams you create). To do this, adjust the Intended Vertical Exaggeration Factor to something larger than one (I would suggest 10 to start with), and then click the Process button to re-create the strip log. If you continue to have problems, it would probably be best for you to send us your project, which includes the database and your current menu settings. You can do this by Backing up the Database through the File menu, and sending us the zip file created during the backup process. You can send this to tech @ rockware.com Best Regards, Alison
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